Difference between revisions of "IC-ICT PBS-PRO cluster installation"
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Latest revision as of 14:53, 15 March 2007
CE installation
- Install lcg-CE rpms
- up2date-nox -u lcg-CE
[root@hep-ce aggarwa]# up2date-nox -u lcg-CE --nosig --dry-run Fetching Obsoletes list for channel: rhel-i386-as-3... Fetching Obsoletes list for channel: glite3... Fetching obsoletes list for http://glitesoft.cern.ch/EGEE/gLite/APT/R3.0/rhel30/... Fetching http://glitesoft.cern.ch/EGEE/gLite/APT/R3.0/rhel30//headers/header.info... ######################################## #################### Fetching Obsoletes list for channel: lcg2_CA... Fetching obsoletes list for http://linuxsoft.cern.ch/LCG-CAs/current... Fetching http://linuxsoft.cern.ch/LCG-CAs/current/headers/header.info... ######################################## #################### Fetching rpm headers... ######################################## Name Version Rel ---------------------------------------------------------- lcg-CE 3.0.11 1 noarch Testing package set / solving RPM inter-dependencies... Downloading headers to solve dependencies... ####################################### Downloading headers to solve dependencies... ####################################### Downloading headers to solve dependencies... ####################################### Downloading headers to solve dependencies... ####################################### Downloading headers to solve dependencies... ####################################### Downloading headers to solve dependencies... There was a package dependency problem. The message was: Unresolvable chain of dependencies: edg-java-security-1.5.11-1_sl3 requires j2sdk >= 1.4.1 edg-java-security-client-1.5.11-1_sl3 requires j2sdk >= 1.4.1 edg-java-security-test-1.5.11-1_sl3 requires j2sdk >= 1.4.1 edg-wl-common-api-java-interface_gcc3_2_ requires j2sdk >= 1.4.1_01 edg-wl-common-api-java_gcc3_2_2-lcg2.1.7 requires j2sdk >= 1.4.1_01 edg-wl-ui-api-java-interface_gcc3_2_2-lc requires j2sdk >= 1.4.1_01 edg-wl-ui-api-java_gcc3_2_2-lcg2.1.74-3_ requires j2sdk >= 1.4.1_01 lcg-CE 3.0.11-1 requires j2sdk mysql 3.23.58-16.RHEL3.1 conflicts with MySQL The following packages were added to your selection to satisfy dependencies: Package Required by ---------------------------------------------------------------------------- boost-g3-1.29.1-06vh_sl3.i486 lcg-CE-3.0.11-1 boost-g3 bouncycastle-jdk14-1.19-2.noarch lcg-CE-3.0.11-1 bouncycastle-jdk14 edg-info-ce-lcg2.6.39-1_sl3.i386 lcg-CE-3.0.11-1 edg-info-ce edg-info-main-lcg3.0.23-1_sl3.i386 lcg-CE-3.0.11-1 edg-info-main edg-wl-bypass_gcc3_2_2-lcg2.5.3-29_sl3.i486lcg-CE-3.0.11-1 edg-wl-bypass_gcc3_2_2 edg-wl-chkpt-api_gcc3_2_2-lcg2.1.74-3_sl3.i486lcg-CE-3.0.11-1 edg-wl-chkpt-api_gcc3_2_2 edg-wl-common-api-java-interface_gcc3_2_2-lcg2.1.74-3_sl3.i486lcg-CE-3.0.11-1 edg-wl-common-api-java-interface_gcc3_2_2 edg-wl-common-api-java_gcc3_2_2-lcg2.1.74-3_sl3.i486lcg-CE-3.0.11-1 edg-wl-common-api-java_gcc3_2_2 edg-wl-common-api_gcc3_2_2-lcg2.1.74-3_sl3.i486lcg-CE-3.0.11-1 edg-wl-common-api_gcc3_2_2 edg-wl-config_gcc3_2_2-lcg2.1.74-3_sl3.i486lcg-CE-3.0.11-1 edg-wl-config_gcc3_2_2 edg-wl-locallogger_gcc3_2_2-lcg2.1.74-3_sl3.i486lcg-CE-3.0.11-1 edg-wl-locallogger_gcc3_2_2 edg-wl-logging-api-c_gcc3_2_2-lcg2.1.74-3_sl3.i486lcg-CE-3.0.11-1 edg-wl-logging-api-c_gcc3_2_2 edg-wl-logging-api-cpp_gcc3_2_2-lcg2.1.74-3_sl3.i486lcg-CE-3.0.11-1 edg-wl-logging-api-cpp_gcc3_2_2 edg-wl-logging-api-sh_gcc3_2_2-lcg2.1.74-3_sl3.i486lcg-CE-3.0.11-1 edg-wl-logging-api-sh_gcc3_2_2 edg-wl-services-common_gcc3_2_2-lcg2.1.74-3_sl3.i486lcg-CE-3.0.11-1 edg-wl-services-common_gcc3_2_2 edg-wl-ui-api-cpp_gcc3_2_2-lcg2.1.74-3_sl3.i486lcg-CE-3.0.11-1 edg-wl-ui-api-cpp_gcc3_2_2 edg-wl-ui-api-java-interface_gcc3_2_2-lcg2.1.74-3_sl3.i486lcg-CE-3.0.11-1 edg-wl-ui-api-java-interface_gcc3_2_2 edg-wl-ui-api-java_gcc3_2_2-lcg2.1.74-3_sl3.i486lcg-CE-3.0.11-1 edg-wl-ui-api-java_gcc3_2_2 edg-wl-ui-cli_gcc3_2_2-lcg2.1.74-3_sl3.i486lcg-CE-3.0.11-1 edg-wl-ui-cli_gcc3_2_2 edg-wl-ui-config_gcc3_2_2-lcg2.1.74-3_sl3.i486lcg-CE-3.0.11-1 edg-wl-ui-config_gcc3_2_2 edg-wl-ui-gui_gcc3_2_2-lcg2.1.74-3_sl3.i486lcg-CE-3.0.11-1 edg-wl-ui-gui_gcc3_2_2 gridice-sensor-1.6.0-23.i386 lcg-CE-3.0.11-1 gridice-sensor lcg-version-3.0.2-1.noarch lcg-CE-3.0.11-1 lcg-version perl-SOAP-Lite-0.55-sl3.i386 lcg-CE-3.0.11-1 perl-SOAP-Lite perl-Tie-Syslog-1.07-1.i386 lcg-CE-3.0.11-1 perl-Tie-Syslog perl-URI-1.21-7.noarch edg-pool2info-1.0.1-1_sl3 perl-URI perl-URI-1.21-7.noarch edg-netmon-info-provider-1.0.8-1_sl3 perl-URI perl-XML-SAX-Base-1.04-1.i386 lcg-CE-3.0.11-1 perl-XML-SAX-Base perl-ldap-0.31-sl3.i386 lcg-CE-3.0.11-1 perl-ldap [root@hep-ce aggarwa]# up2date-nox -u j2sdk --nosig --dry-run Fetching Obsoletes list for channel: rhel-i386-as-3... Fetching Obsoletes list for channel: glite3... Fetching Obsoletes list for channel: lcg2_CA... Fetching rpm headers... ######################################## Name Version Rel ---------------------------------------------------------- All packages are currently up to date
- install j2sdk
- install perl-Net-LDAP
- Re-try lcg-CE installation
Installing... 1:glite-rgma-base ########################################### [100%] 2:log4j ########################################### [100%] 3:lcg-info-generic ########################################### [100%] 4:glite-apel-core ########################################### [100%] 5:perl-URI ########################################### [100%] 6:glite-essentials-java ########################################### [100%] 7:gpt ########################################### [100%] ...... 070315 13:53:44 [Warning] Asked for 196608 thread stack, but got 126976 /usr/bin/mysql_install_db: line 1: 23723 Segmentation fault /usr/sbin/mysqld --bootstrap --skip-grant-tables --basedir=/ --datadir=/var/lib/mysql --skip-innodb --skip-bdb --skip-ndbcluster --user=mysql --max_allowed_packet=8M --net_buffer_length=16K cat: write error: Broken pipe Installation of system tables failed! Examine the logs in /var/lib/mysql for more information. You can also try to start the mysqld daemon with: /usr/sbin/mysqld --skip-grant & You can use the command line tool /usr/bin/mysql to connect to the mysql database and look at the grant tables: shell> /usr/bin/mysql -u root mysql mysql> show tables Try 'mysqld --help' if you have problems with paths. Using --log gives you a log in /var/lib/mysql that may be helpful. The latest information about MySQL is available on the web at http://www.mysql.com Please consult the MySQL manual section: 'Problems running mysql_install_db', and the manual section that describes problems on your OS. Another information source is the MySQL email archive. Please check all of the above before mailing us! And if you do mail us, you MUST use the /usr/bin/mysqlbug script! Starting MySQL...................................[FAILED] 60:MySQL-client ########################################### [100%] 61:edg-wl-ui-api-cpp_gcc3_########################################### [100%] 62:edg-wl-logging-api-sh_g########################################### [100%] 63:edg-wl-locallogger_gcc3########################################### [100%] 64:edg-wl-ui-gui_gcc3_2_2 ########################################### [100%] 65:edg-lcas_gcc3_2_2-voms_########################################### [100%] 66:glite-security-voms-adm########################################### [100%] 67:edg-java-data-util ########################################### [100%] 68:lcg-auditlog ########################################### [100%] 69:xerces-j1 ########################################### [100%] 70:glite-rgma-command-line########################################### [100%] 71:vdt_globus_info_server ########################################### [100%] 72:lcg-extra-jobmanagers ########################################### [100%] 73:glite-rgma-log4cpp ########################################### [100%] 74:edg-wl-ui-api-java-inte########################################### [100%] 75:edg-wl-common-api-java-########################################### [100%] 76:edg-info-service ########################################### [100%] 77:glite-apel-publisher ########################################### [100%] 78:glite-rgma-gin ########################################### [100%] 79:glite-rgma-log4j ########################################### [100%] error: unpacking of archive failed on file /opt/glite/share/doc/rgma-log4j/html/overview-tree.html;45f94f10: cpio: read There was a fatal RPM install error. The message was: There was a rpm unpack error installing the package: glite-rgma-log4j-5.0.2-1
- Install package glite-rgma-log4j-5.0.2-1
[root@hep-ce aggarwa]# up2date-nox -u glite-rgma-log4j --nosig Fetching Obsoletes list for channel: rhel-i386-as-3... Fetching Obsoletes list for channel: glite3... Fetching Obsoletes list for channel: lcg2_CA... Fetching rpm headers... ######################################## Name Version Rel ---------------------------------------------------------- glite-rgma-log4j 5.0.2 1 noarch Testing package set / solving RPM inter-dependencies... ######################################## error: rpmts_HdrFromFdno: MD5 digest: BAD Expected(6b81ac1c12fa8ca297a0c5c3a3bbf4bc) != (ffbca2a0aa5db9034a59bfb485f6bb52) glite-rgma-log4j-5.0.2-1.no ########################## Done. Preparing ########################################### [100%] Installing... 1:glite-rgma-log4j ########################################### [100%] [root@hep-ce aggarwa]#
- up2date-nox -u glite-yaim --nosig
