Difference between revisions of "Imperial Condor Log"

Latest revision as of 14:44, 9 June 2016

Plain condor with GPU node as WN

• Install plain condor on cetest03 and lt2gpu00

wget https://research.cs.wisc.edu/htcondor/yum/repo.d/htcondor-stable-rhel6.repo
rpm --import http://research.cs.wisc.edu/htcondor/yum/RPM-GPG-KEY-HTCondor
yum install condor

• Open the relevant ports on both machines (wiki not secret enough to list here, I think)
• Make some users (same uid/gid on both machines).
  (Because I am no good at remembering options, here's two samples:)

   useradd -m -d /srv/localstage/user004 user004
   useradd -m -d /srv/localstage/user002 -g user002 -u 502 user002  

• All configurations go in /etc/condor/condor_config.local.
  We'll try and keep the configurations as identical on both nodes as possible, even if not every option is needed by every node.
• After changing the configuration condor needs to be restarted to reload the config file:

  service condor restart 

• These basic config files work:
  

On cetest03:

  CONDOR_HOST = cetest03.grid.hep.ph.ic.ac.uk
  # this makes it a scheduler
  DAEMON_LIST = COLLECTOR, MASTER, NEGOTIATOR, SCHEDD
  SEC_PASSWORD_FILE = /etc/condor/pool_password
  ALLOW_WRITE = *.grid.hep.ph.ic.ac.uk
  UID_DOMAIN = cetest03.grid.hep.ph.ic.ac.uk
  use feature : GPUs
  # stop the emails
  SCHEDD_RESTART_REPORT = 
  

  CONDOR_HOST = cetest03.grid.hep.ph.ic.ac.uk
  # this makes it a WN
  DAEMON_LIST = MASTER, STARTD
  # get server and WN to talk to each other
  SEC_PASSWORD_FILE = /etc/condor/pool_password
  ALLOW_WRITE = *.grid.hep.ph.ic.ac.uk
  # I don't want to be nobody: keep same user name throught
  UID_DOMAIN = cetest03.grid.hep.ph.ic.ac.uk
  use feature : GPUs
  SCHEDD_RESTART_REPORT = 

• Too see what's going on:
  • On cetest03: condor_q, condor_status -long

[user001@cetest03 ~]$ condor_q
-- Schedd: cetest03.grid.hep.ph.ic.ac.uk : <146.179.247.252:15363?...
 ID      OWNER            SUBMITTED     RUN_TIME ST PRI SIZE CMD               
  19.0   user001         6/6  14:42   0+00:00:02 R  0   0.0  hello_world.sh

1 jobs; 0 completed, 0 removed, 0 idle, 1 running, 0 held, 0 suspended

• • (I know there's a double dot, but I can't make it go away without side effects) On lt2gpu00:

[root@lt2gpu00 ~]# condor_status 
  Name               OpSys      Arch   State     Activity LoadAv Mem   ActvtyTime

  slot10@lt2gpu00.gr LINUX      X86_64 Unclaimed Idle      0.000 4029  0+00:00:26
  slot11@lt2gpu00.gr LINUX      X86_64 Unclaimed Idle      0.000 4029  0+00:00:27
  [snip]

• • The other helpful command to see what's going on: condor_config_val -dump

• Submit a test job (as user001 on cetest03)
  

[user001@cetest03 ~]$ cat test.submit

Universe       = vanilla
Executable     = hello_world.sh  

input   = /dev/null
output  = hello.out.$(Cluster)                
error   = hello.error.$(ClusterId)       

request_GPUs = 1
Queue

[user001@cetest03 ~]$ cat hello_world.sh
#!/bin/bash

echo "Hello World"
echo "Today is: " `date`
echo "I am running on: " `hostname`
echo "I am " `whoami`

env | sort

echo "+++++++++++++++++++++++++++++++++++"

/srv/localstage/sf105/samples/NVIDIA_CUDA-7.5_Samples/bin/x86_64/linux/release/deviceQuery

sleep 30

The two different GPUs can be distinguished by their Bus ID: 4 and 10. To submit the job do:

condor_submit test.submit

For non-GPU jobs set request_GPUs = 0

Only allow jobs that use GPU

Add the following on lt2gpu00:

SLOT_TYPE_1 = cpus=25%
SLOT_TYPE_1_PARTITIONABLE = False
NUM_SLOTS_TYPE_1 = 4
START = RequestGpus > 0

Jobs that don't request a GPU will not start.